Works with any genome
TransFind works with whatever genome you do. Be it Human, Mouse, Rat, Yeast or Fungus TransFind
can be used to predict Transcription factor binding sites in your organism.
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Works with several publically available algorithms for transcription factor binding site prediction
or your own in house algorithms.
TransFind currently interfaces with MEME and GIBBS through an encrypted connection to deliver queries
and return results. TransFind also has an API which allow you to define your own file type to our parser for
easy import of data that has been analyzed with your own proprietary algorithms.
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Versatile data import.
Easy cut and paste of a GeneList from GeneSpring®
You won't have to spend a lot of time formatting your data to get it into TransFind. With sequence for the most popular genomes
already loaded entering your data most of the time is as easy as cutting and pasting a list of accession numbers.
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Your results are automatically indexed against a public index of known
transcription factor binding sites and labelled accordingly
Who wants to see unlabelled results? None of our users, that's why we label predicted transcription
factors against those currently known from the literature.
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Export Vector based, publication quality http://www.genomicdiscoverytools.com/images quickly and easily
Vector based publication quality http://www.genomicdiscoverytools.com/images as well as textual information on your current view can be
exported with the simple press of a button.
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Visualize the concensus sequence of a motif or module
Export the most important sequence and get back to the bench quickly.
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Compare two or more results to one another
Compare one or more motif predictions with a simple intuative interface. Ask complex questions quickly and easily.
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FEATURES
